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There are several matches for 'sigma factor AlgU'.
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197 matches
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organism
protein
1)
Chromobacterium haemolyticum
AlgZ - Unannotated protein.
[a.k.a. GCA_000758475_03136, unannotated protein, A0A1W0CJN9,
Sigma factor AlgU
]
2)
Plesiocystis pacifica
EDM78696.1 -
Sigma
factor
AlgU
; COG1595 DNA-directed RNA polymerase specialized
sigma
subunit, sigma24 homolog; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. PPSIR1_29633, A6G694, EDM78696,
sigma factor AlgU
,
Sigma factor AlgU
, ...]
3)
Pseudomonas aeruginosa
algU -
Sigma
factor
AlgU
;
Sigma
factors
are initiation
factors
that promote the attachment of RNA polymerase to specific initiation sites and are then released. This
sigma
factor
regulates genes such as algD, involved in alginate biosynthesis.
[a.k.a. PA0762, AAG04151.1, WP_003085543.1,
sigma factor AlgU
,
Sigma factor AlgU
, ...]
4)
Pseudomonas entomophila
algU -
Sigma
factor
AlgU
; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. PSEEN4296, CAK16983.1, IPR000838,
sigma factor AlgU
,
Sigma factor AlgU
, ...]
5)
gamma proteobacterium HTCC2207
EAS46858.1 -
Sigma
factor
AlgU
; COG1595 DNA-directed RNA polymerase specialized
sigma
subunit, sigma24 homolog; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. GB2207_04497, WP_007232385.1, Q1YS37_9GAMM,
sigma factor AlgU
,
Sigma factor AlgU
, ...]
6)
Halomonas sp. KO116
AJY51070.1 - RNA polymerase,
sigma
-24 subunit, RpoE, ECF subfamily; KEGG: rpoE; RNA polymerase
sigma
factor
AlgU
; TIGRFAM: RNA polymerase
sigma
factor
RpoE; RNA polymerase
sigma
factor
,
sigma
-70 family; PFAM:
sigma
-70 region 2 domain protein;
Sigma
-70 region 4 type 2; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. KO116_02595, A0A0D5M4B9_9GAMM, NZ_CP011052.1]
7)
Pseudomonas putida W619
ACA71572.1 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase
sigma
factor
,
sigma
-70 family; RNA polymerase
sigma
factor
RpoE; PFAM:
sigma
-70 region 2 domain protein;
sigma
-70 region 4 domain protein;
Sigma
-70 region 4 type 2; KEGG: pen:PSEEN4296
sigma
factor
AlgU
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. PputW619_1067, IPR000838, NC_010501.1]
8)
gamma proteobacterium HTCC2143
EAW31526.1 -
Sigma
factor
algU
negative regulatory protein MucA; An anti-
sigma
factor
for extracytoplasmic function (ECF)
sigma
factor
sigma
-E (RpoE). ECF
sigma
factors
are held in an inactive form by an anti-
sigma
factor
until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytop [...]
[a.k.a. GP2143_08249, A0YCK7_9GAMM, Sigma-E anti-sigma factor RseA]
9)
Spirosoma linguale
Slin_2375 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase
sigma
-70
factor
; RNA polymerase
sigma
factor
,
sigma
-70 family; PFAM:
Sigma
-70 region 4 type 2;
sigma
-70 region 2 domain protein; KEGG: psa:PST_1223 RNA polymerase
sigma
factor
AlgU
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ADB38395.1, ADB38395, sli:Slin_2375]
10)
Rhodopirellula baltica
RB10049 - Probable alternative
sigma
factor
AlgU
; PMID: 8052622 best DB hits: BLAST: gb:AAF18265.1; U22895_1 (U22895) alternative
sigma
factor
AlgU
; E=2e-04 gb:AAF01335.1; AF190580_1 (AF190580) alternate
sigma
factor
AlgT; E=8e-04 gb:AAC98488.1; (AF049107) putative ECF
sigma
factor
RpoE1; E=0.001 COG: PA0762; COG1595 DNA-directed RNA polymerase specialized
sigma
; E=3e-04 PFAM: PF00776;
Sigma
-70
factor
(ECF subfamily); E=3.1e-05 PF00140;
Sigma
-70
factor
; E=0.6.
[a.k.a. CAD76604.1, 1790446, NP_869218]
11)
Caldanaerobacter subterraneus
RpoE2 - DNA-directed RNA polymerase specialized
sigma
subunits, sigma24 homologs; Best Blastp hit = gi|548832|sp|Q06198|RPSH_PSEAE RNA POLYMERASE
SIGMA
-H
FACTOR
(
SIGMA
-30) gi|477626|pir||A49704 transcription initiation
factor
sigma
H homolog
AlgU
- Pseudomonas aeruginosa gi|11352570|pir||B83550
sigma
factor
AlgU
PA0762 [imported] - Pseudomonas aeruginosa (strain PAO1) gi|441073|gb|AAA87628.1| (L14760)
algU
gene product [Pseudomonas aeruginosa] gi|441077|gb|AAA87631.1| (L14761)
algU
gene product [Pseudomonas aeruginosa] gi|550507|gb|AAA64439.1| (L36379) alternative
sigma
factor
[Pseudomonas aer [...]
[a.k.a. TTE0872, AAM24128.1, AAM24128]
12)
Azoarcus sp. BH72
sigZ - Putative RNA polymerase
sigma
factor
sigZ. The
sigma
factor
is an initiation
factor
that promotes attachment of the RNA polymerase to specific initiation sites and then is released. Similar to SWISSPROT: sprot|SIGZ_BACSU (23% Bacillus subtilis, RNA polymerase
sigma
factor
SigZ) / sprot|RPSH_PSEAE (28% Pseudomonas aeruginosa, RNA polymerase
sigma
-h
factor
(
sigma
-30),
AlgU
or AlgT) InterPro: IPR000838 Sigma70_ECF. Pfam: PF07638 ECF
sigma
factor
; High confidence in function and specificity.
[a.k.a. CAL95578.1, azo2962, putative RNA polymerase sigma factor SigZ]
13)
Desulfonispora thiosulfatigenes
SMB84386.1 - RNA polymerase,
sigma
30 subunit, SigH; InterPro IPR013249:IPR007627:IPR000792:IPR000943:IPR014284:IPR0142 18; COGs: COG1595 DNA-directed RNA polymerase specialized
sigma
subunit sigma24 homolog; KEGG: sdn:Sden_2772 RNA polymerase
sigma
factor
AlgU
; SPTR: A1HTH2 RNA polymerase,
sigma
-24 subunit, ECF subfamily; PFAM:
sigma
-70 region 2 domain protein;
Sigma
-70 region 4 type 2; TIGRFAM: RNA polymerase
sigma
-H
factor
; RNA polymerase
sigma
factor
,
sigma
-70 family.
[a.k.a. SAMN00017405_2336, RNA polymerase, sigma 30 subunit, SigH, SMB84386]
14)
Desulfofarcimen acetoxidans
Dtox_3616 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase
sigma
factor
,
sigma
-70 family; PFAM:
sigma
-70 region 2 domain protein;
Sigma
-70 region 4 type 2;
sigma
-70 region 4 domain protein; KEGG: sdn:Sden_2772 RNA polymerase
sigma
factor
AlgU
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ACV64328.1, ACV64328, IPR014284]
15)
Pirellula staleyi
Psta_0222 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase
sigma
factor
,
sigma
-70 family; PFAM:
Sigma
-70 region 4 type 2;
sigma
-70 region 2 domain protein;
sigma
-70 region 4 domain protein; KEGG: pmy:Pmen_1467 RNA polymerase
sigma
factor
AlgU
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ADB14918.1, WP_012909183.1, IPR000838]
16)
Planctopirus limnophila
Plim_0700 - TIGRFAM: RNA polymerase
sigma
factor
,
sigma
-70 family; PFAM:
sigma
-70 region 2 domain protein;
Sigma
-70 region 4 type 2; KEGG: pen:PSEEN4296 RNA polymerase
sigma
factor
AlgU
; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. ADG66547.1, ADG66547, NC_014148.1]
17)
Marinomonas posidonica
AEF55776.1 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; KEGG: hel:HELO_3029 RNA polymerase
sigma
factor
AlgU
; TIGRFAM: RNA polymerase
sigma
-70 RpoE type; RNA polymerase
sigma
-70; PFAM: RNA polymerase
sigma
factor
70, region 4 type 2; RNA polymerase
sigma
-70 region 2; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. Mar181_2745, mpc:Mar181_2745, 0003700]
18)
Pseudomonas fulva
AEF23204.1 - RNA polymerase,
sigma
-24 subunit, ECF subfamily; KEGG: pfs:PFLU1467 RNA polymerase
sigma
factor
AlgU
; TIGRFAM: RNA polymerase
sigma
-70 RpoE type; RNA polymerase
sigma
-70; PFAM: RNA polymerase
sigma
-70 region 2; RNA polymerase
sigma
factor
70, region 4 type 2; Belongs to the
sigma
-70
factor
family. ECF subfamily.
[a.k.a. Psefu_3242, F6AA65_PSEF1, AEF23204]
19)
Rhodopirellula baltica
sigW-2 - RNA polymerase
sigma
factor
sigW; PMID: 8432708 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE
SIGMA
FACTOR
SIGW; E=3e-23 gb:AAF18265.1; U22895_1 (U22895) alternative
sigma
factor
AlgU
; E=6e-18 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type
sigma
factor
; E=2e-17 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized
sigma
; E=3e-24 PFAM: PF00776;
Sigma
-70
factor
(ECF subfamily); E=9.9e-15.
[a.k.a. CAD78667.1, RB8492, RNA polymerase sigma factor sigW]
20)
Rhodopirellula baltica
sigW-4 - RNA polymerase
sigma
factor
sigW; PMID: 8432708 PMID: 7961421 best DB hits: BLAST: swissprot:Q45585; SIGW_BACSU RNA POLYMERASE
SIGMA
FACTOR
SIGW; E=1e-15 ddbj:BAB03982.1; (AP001507) RNA polymerase ECF-type
sigma
factor
; E=5e-13 gb:AAF18265.1; U22895_1 (U22895) alternative
sigma
factor
AlgU
; E=3e-10 COG: BS_sigW; COG1595 DNA-directed RNA polymerase specialized
sigma
; E=1e-16 PFAM: PF00776;
Sigma
-70
factor
(ECF subfamily); E=2.9e-11.
[a.k.a. RB8816, CAD75935.1, RNA polymerase sigma factor sigW]
197 matches
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